DCD – a novel plant specific domain in proteins involved in development and programmed cell death

  • Background: Recognition of microbial pathogens by plants triggers the hypersensitive reaction, a common form of programmed cell death in plants. These dying cells generate signals that activate the plant immune system and alarm the neighboring cells as well as the whole plant to activate defense responses to limit the spread of the pathogen. The molecular mechanisms behind the hypersensitive reaction are largely unknown except for the recognition process of pathogens. We delineate the NRP-gene in soybean, which is specifically induced during this programmed cell death and contains a novel protein domain, which is commonly found in different plant proteins. Results: The sequence analysis of the protein, encoded by the NRP-gene from soybean, led to the identification of a novel domain, which we named DCD, because it is found in plant proteins involved in d evelopment and c ell d eath. The domain is shared by several proteins in the Arabidopsis and the rice genomes, which otherwise show a different protein architecture. Biological studies indicate a role of these proteins in phytohormone response, embryo development and programmed cell by pathogens or ozone. Conclusion: It is tempting to speculate, that the DCD domain mediates signaling in plant development and programmed cell death and could thus be used to identify interacting proteins to gain further molecular insights into these processes.

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Author:Raimund Tenhaken, Tobias Doerks, Peer Bork
URN:urn:nbn:de:hebis:30-14464
DOI:https://doi.org/10.1186/1471-2105-6-169
ISSN:1471-2105
Pubmed Id:https://pubmed.ncbi.nlm.nih.gov/16008837
Parent Title (English):BMC bioinformatics
Publisher:BioMed Central ; Springer
Place of publication:London ; Berlin ; Heidelberg
Document Type:Article
Language:English
Year of Completion:2005
Date of first Publication:2005/07/11
Publishing Institution:Universitätsbibliothek Johann Christian Senckenberg
Release Date:2005/09/08
Tag:Cell Death Program; Hypersensitive Reaction; Programme Cell Death; Salicylic Acid; Thalassiosira Pseudonana
Volume:6
Issue:Art. 169
Page Number:6
First Page:1
Last Page:6
Note:
Copyright: © Tenhaken et al; licensee BioMed Central Ltd. 2005. This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
Source:BMC Bioinformatics 2005, 6:169, © 2005 Tenhaken et al; This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), http://www.biomedcentral.com/1471-2105/6/169
HeBIS-PPN:189066970
Institutes:Biochemie, Chemie und Pharmazie / Biochemie und Chemie
Dewey Decimal Classification:5 Naturwissenschaften und Mathematik / 57 Biowissenschaften; Biologie / 570 Biowissenschaften; Biologie
Sammlungen:Sammlung Biologie / Sondersammelgebiets-Volltexte
Licence (German):License LogoCreative Commons - Namensnennung 2.0