Environment-dependent epistasis increases phenotypic diversity in gene regulatory networks.

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Version: author
License: CC BY-NC 4.0
Serval ID
serval:BIB_2BCC90477E24
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
Environment-dependent epistasis increases phenotypic diversity in gene regulatory networks.
Journal
Science advances
Author(s)
Baier F., Gauye F., Perez-Carrasco R., Payne J.L., Schaerli Y.
ISSN
2375-2548 (Electronic)
ISSN-L
2375-2548
Publication state
Published
Issued date
24/05/2023
Peer-reviewed
Oui
Volume
9
Number
21
Pages
eadf1773
Language
english
Notes
Publication types: Journal Article
Publication Status: ppublish
Abstract
Mutations to gene regulatory networks can be maladaptive or a source of evolutionary novelty. Epistasis confounds our understanding of how mutations affect the expression patterns of gene regulatory networks, a challenge exacerbated by the dependence of epistasis on the environment. We used the toolkit of synthetic biology to systematically assay the effects of pairwise and triplet combinations of mutant genotypes on the expression pattern of a gene regulatory network expressed in Escherichia coli that interprets an inducer gradient across a spatial domain. We uncovered a preponderance of epistasis that can switch in magnitude and sign across the inducer gradient to produce a greater diversity of expression pattern phenotypes than would be possible in the absence of such environment-dependent epistasis. We discuss our findings in the context of the evolution of hybrid incompatibilities and evolutionary novelties.
Keywords
Gene Regulatory Networks, Epistasis, Genetic, Phenotype, Genotype, Biological Assay, Escherichia coli/genetics
Pubmed
Web of science
Open Access
Yes
Create date
31/05/2023 9:20
Last modification date
13/01/2024 8:14
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