Increasing workflow development speed and reproducibility with Vectools [version 2; referees: 2 approved]

  • Despite advances in bioinformatics, custom scripts remain a source of difficulty, slowing workflow development and hampering reproducibility. Here, we introduce Vectools, a command-line tool-suite to reduce reliance on custom scripts and improve reproducibility by offering a wide range of common easy-to-use functions for table and vector manipulation. Vectools also offers a number of vector related functions to speed up workflow development, such as simple machine learning and common statistics functions.
Metadaten
Author:Tyler Weirick, Raphael Müller, Shizuka Uchida
URN:urn:nbn:de:hebis:30:3-486171
DOI:https://doi.org/10.12688/f1000research.16301.2
ISSN:2046-1402
Pubmed Id:https://pubmed.ncbi.nlm.nih.gov/30631441
Parent Title (English):F1000Research
Publisher:F1000 Research Ltd
Place of publication:London
Document Type:Article
Language:English
Year of Completion:2018
Date of first Publication:2018/10/23
Publishing Institution:Universitätsbibliothek Johann Christian Senckenberg
Release Date:2019/01/15
Tag:bioinformatics; matrix; reproducibility; spreadsheet; vector; workflow
Volume:7
Issue:Art. 1499
Edition:version 2
Page Number:10
First Page:1
Last Page:10
Note:
Copyright:  © 2018 Weirick T et al. This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
HeBIS-PPN:446277010
Institutes:Medizin / Medizin
Dewey Decimal Classification:6 Technik, Medizin, angewandte Wissenschaften / 61 Medizin und Gesundheit / 610 Medizin und Gesundheit
Sammlungen:Universitätspublikationen
Licence (German):License LogoCreative Commons - Namensnennung 4.0

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