Skip to main content
Log in

Differential Gene Expression of Longan Under Simulated Acid Rain Stress

  • Published:
Bulletin of Environmental Contamination and Toxicology Aims and scope Submit manuscript

Abstract

Differential gene expression profile was studied in Dimocarpus longan Lour. in response to treatments of simulated acid rain with pH 2.5, 3.5, and a control (pH 5.6) using differential display reverse transcription polymerase chain reaction (DDRT-PCR). Results showed that mRNA differential display conditions were optimized to find an expressed sequence tag (EST) related with acid rain stress. The potential encoding products had 80% similarity with a transcription initiation factor IIF of Gossypium raimondii and 81% similarity with a protein product of Theobroma cacao. This fragment is the transcription factor activated by second messenger substances in longan leaves after signal perception of acid rain.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5

Similar content being viewed by others

References

  • Bellani LM, Rinallo C, Muccifora S, Gori P (1997) Effects of simulated acid rain on pollen physiology and ultrastructure in the apple. Environ Pollut 95:357–362

    Article  CAS  Google Scholar 

  • Bozkurt O, Unver T, Akkaya MS (2007) Genes associated with resistance to wheat yellow rust disease identified by differential display analysis. Physiol Mol Plant Pathol 71:251–259

    Article  CAS  Google Scholar 

  • Carginale V, Maria G, Capasso C, Ionata E, La Cara F, Pastore M, Bertaccini A, Capasso A (2004) Identification of genes expressed in response to phytoplasma infection in leaves of Prunus armeniaca by messenger RNA differential display. Gene 332:29–34

    Article  CAS  Google Scholar 

  • Chen YH, Zhao S, Yan QQ, Li YS, Xiao GY (2006) Studies on genes related to submergence tolerant using differential display technique in rice. J Agric Biotech 14(6):894–898

    CAS  Google Scholar 

  • Chen J, Wang WH, Liu TW, Wu FH, Zheng HL (2013) Photosynthetic and antioxidant responses of Liquidambar formosana and Schima superba seedlings to sulfuric-rich and nitric-rich simulated acid rain. Plant Physiol Biochem 64:41–51

    Article  CAS  Google Scholar 

  • Dang ZH, Qi Q, Zhang HR, Li HY, Wu SB, Wang YC (2014) Identification of salt stress induced genes from the RNA-Seq data of Reaumuria trigyna using differential-display reverse transcription PCR. Int J Genom 2014:1–7

    Article  Google Scholar 

  • Feng ZW (2000) Ecological effects and control strategies of acid deposition on ecosystems in China. Yunnan Environ Sci 19:1–6

    CAS  Google Scholar 

  • Ishibashia T, Dangkulwanicha M, Coelloa Y, Lionbergera TA, Lubkowskah L, Ponticellii AS, Kashlevh M, Bustamantea C (2014) Transcription factors IIS and IIF enhance transcription efficiency by differentially modifying RNA polymerase pausing dynamics. PNAS 111(9): 3419–3424

    Article  Google Scholar 

  • Liu YJ, Zhang AN, Jia JF, Li AZ (2007) Cloning of salt stress responsive cDNA from wheat and resistant analysis of differential fragment SR07 in transgenic tobacco. J Genet Genom 34:842–850

    Article  CAS  Google Scholar 

  • Liu TW, Niu L, Fu B, Chen J, Wu FH, Chen J, Wang WH, Hu WJ, He JX, Zheng HL (2013) A transcriptomic study reveals differentially expressed genes and pathways respond to simulated acid rain in Arabidopsis thaliana. Genome 56(1):49–60

    Article  CAS  Google Scholar 

  • Lu H, Zhang JQ, Zhang T L, Gou XJ (2004) An improved method of mRNA differential display for salt-base induced gene expression of N.sibirica Pall. J Chengdu Univ (Natural Sci) 23(2):1–6

    CAS  Google Scholar 

  • Maqbool A, Zahur M, Irfan M, Younas M, Barozai K, Rashid B, Husnain T, Riazuddin S (2008) Identification and expression of six drought responsive transcripts through differential display in desi cotton (Gossypium aroreum). Mol Biol 42:492–498

    Article  CAS  Google Scholar 

  • Odiyi BO, Bamidele JF (2014) Effects of simulated acid rain on growth and yield of cassava Manihot esculenta (Crantz). J Agric Sci 6(1):96–101

    Google Scholar 

  • Ohta H, Shibata Y, Haseyama Y, Yoshino Y, Suzuki T, Kagasawa T, Kamei A, Ikeuchi M, Enami I (2005) Identification of genes expressed in response to acid stress in Synechocystis sp. PCC 6803 using DNA microarrays. Photosyn Res 84:225–230

    Article  CAS  Google Scholar 

  • Pan TF, Li YY, Ma CL, Qiu DL (2015) Calcium affecting protein expression in longan under simulated acid rain stress. Environ Sci Pollut Res 22(16):12215–12223

    Article  CAS  Google Scholar 

  • Pasentsis K, Falara V, Pateraki I, Gerasopoulos D, Kanellis AK (2007) Identification and expression profiling of low oxygen regulated genes from citrus flavedo tissues using RT-PCR differential display. J Exp Bot 58(8):2203–2216

    Article  CAS  Google Scholar 

  • Percy KE, Baker EA (1990) Effects of simulated acid rain on epicuticular wax production, morphology, chemical composition and on cuticular membrane thickness in two clones of Sitkaspruce [Picea sitchensis (Bong.) Carr.]. New Phytol 116:9–87

    Article  Google Scholar 

  • Qi GN, Xia JB, Chen SX, Chen YJ (2010) mRNA differential display of tea leaves under polyethylene glycol stress. J Agric Sci 2(4):186–190

    Google Scholar 

  • Qiu DL (2014) Longan production and research in China. Acta Hortic 1029:139–146

    Google Scholar 

  • Qiu DL, Liu XH (2002) Effects of simulated acid rain on photosynthetic function and calcium regulation. Chin J Appl Ecol 3(9):1072–1076

    Google Scholar 

  • Qiu DL, Liu XH, Guo SZ (2005) Effects of simulated acid rain on fertility of litchi. J Environ Sci 17(6):1034–1037

    CAS  Google Scholar 

  • Ralph SG, Chun HJE, Cooper D, Kirkpatrick R, Kolosova N, Gunter L, Tuskan GA, Douglas CJ, Holt RA, Jones SJM, Marra MA, Bohlmann J (2008) Analysis of 4,664 high quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding. BMC Genom 9:57–74

    Article  Google Scholar 

  • Ramlall C, Varghese B, Ramdhani S, Pammenter NW, Bhatt A, Berjak P, Sershen (2015) Effects of simulated acid rain on germination, seedling growth and oxidative metabolism of recalcitrant-seeded Trichilia dregeana grown in its natural seed bank. Physiol Plant 153:149–160

    Article  CAS  Google Scholar 

  • Sharma KD, Nayyar H (2014) Cold stress alters transcription in meiotic anthers of cold tolerant chickpea (Cicer arietinum L.). BMC Res Notes 7(1):717–730

    Article  Google Scholar 

  • Tang DG, Wang W, Pang YB, Liu HJ, Wang SS, Wang RM (1996) Contribution of NOx to acid rain in the area of south Fujian province. Res Environ Sci 9(5):38–40

    Google Scholar 

  • Wan CY, Wilkins TA (1994) A modified hot borate method significantly enhances the yield of high-quality RNA from cotton (Gossypium hirsutum L.). Anal Biochem 223(1):7–12

    Article  CAS  Google Scholar 

  • Wang XQ, Liu Z, Niu L, Fu B (2013) Long-term effects of simulated acid rain stress on a staple forest plant, Pinus massoniana Lamb: a proteomic analysis. Trees 27:297–309

    Article  Google Scholar 

  • Wang YP, Wang Y, Kai WB, Zhao B, Chen P, Sun L, Ji K, Li Q, Dai SJ, Sun YF, Wang YD, Pei YL, Leng P (2014a) Transcriptional regulation of abscisic acid signal core components during cucumber seed germination and under Cu2+, Zn2+, NaCl and simulated acid rain stresses. Plant Physiol Biochem 76:67–76

    Article  CAS  Google Scholar 

  • Wang LH, Wang W, Zhou Q, Huang XH (2014b) Combined effects of lanthanum (III) chloride and acid rain on photosynthetic parameters in rice. Chemosphere 112:355–361

    Article  CAS  Google Scholar 

  • Yoon SY, Park EJ, Choi YI, Bae EK, Kim JH, Park SY, Kang KS, Lee H (2014) Response to drought and salt stress in leaves of poplar (Populus alba × Populus glandulosa) :Expression profiling by oligonucleotide microarry analysis. Plant Physiol Biochem 84:158–168

    Article  CAS  Google Scholar 

  • Yu XY, Lu XY, Chen YH, LiD, Yao J, Zhang HZ (2007) Differential gene expression of senecio × hybridus under heat stress. J Agric Biotech 15(3):459–463

    CAS  Google Scholar 

  • Zhang CK, Lang P, Dane F, Ebel RC, Singh NK, Locy RD, Dozier WA (2005) Cold acclimation induced genes of trifoliate orange (Poncirus trifoliate). Plant Cell Rep 23(10–11):764–769

    Article  CAS  Google Scholar 

Download references

Acknowledgements

This work was supported by the National Natural Science Grant of China (Award No. 30400061), Natural Science Foundation of Fujian Province, China (2011J01082) and Special fund for science and technology innovation of FAFU (CXZX2016107).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Dongliang Qiu.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Zheng, S., Pan, T., Ma, C. et al. Differential Gene Expression of Longan Under Simulated Acid Rain Stress. Bull Environ Contam Toxicol 98, 726–731 (2017). https://doi.org/10.1007/s00128-017-2059-9

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00128-017-2059-9

Keywords

Navigation