Abstract
Fy blood group antigens are carried by the Duffy antigen receptor for chemokines (DARC), a red cells receptor for Plasmodium vivax broadly implicated in human health and diseases. Recombinant VHHs, or nanobodies, the smallest intact antigen binding fragment derivative from the heavy chain-only antibodies present in camelids, were prepared from a dromedary immunized against DARC N-terminal extracellular domain and selected for DARC binding. A described VHH, CA52, does recognize native DARC on cells. It inhibits P. vivax invasion of erythrocytes and displaces interleukin-8 bound to DARC. The targeted epitope overlaps the well-defined DARC Fy6 epitope. K D of CA52–DARC equilibrium is sub-nanomolar, hence ideal to develop diagnostic or therapeutic compounds. Immunocapture by immobilized CA52 yielded highly purified DARC from engineered K562 cells. This first report on a VHH with specificity for a red blood cell protein exemplifies VHHs’ potentialities to target, to purify, and to modulate the function of cellular markers.
Similar content being viewed by others
Abbreviations
- DARC:
-
Duffy antigen receptor for chemokines
- ECD1:
-
First extracellular domain
- CNRGS:
-
Centre National de Reference pour les Groupes Sanguins
References
Pogo AO, Chaudhuri A (2000) The Duffy protein: a malarial and chemokine receptor. Semin Hematol 37:122–129
Rot A (2005) Contribution of Duffy antigen to chemokine function. Cytokine Growth Factor Rev 6:687–694
Rot A, Horuk R (2009) The duffy antigen receptor for chemokines. Methods Enzymol 461:191–206
Tournamille C, Le Van Kim C, Gane P, Cartron JP, Colin Y (1995) Molecular basis and PCR-DNA typing of the Fya/fyb blood group polymorphism. Hum Genet 95:407–410
Nichols ME, Rubinstein P, Barnwell J, Rodriguez de Cordoba S, Rosenfield RE (1987) A new human Duffy blood group specificity defined by a murine monoclonal antibody. Immunogenetics and association with susceptibility to Plasmodium vivax. J Exp Med 166:776–785
Wasniowska K, Petit-LeRoux Y, Tournamille C, Le van Kim C, Cartron JP, Colin Y, Lisowska E, Blanchard D (2002) Structural characterization of the epitope recognized by the new anti-Fy6 monoclonal antibody NaM 185–2C3. Transfus Med 12:205–211
Tournamille C, Le van Kim C, Gane P, Le Pennec PY, Roubinet F, Babinet J, Cartron JP, Colin Y (1998) Arg89Cys substitution results in very low membrane expression of the Duffy antigen/receptor for chemokines in Fy(x) individuals. Blood 92:2147–2156
Tournamille C, Colin Y, Cartron JP, Le Van Kim C (1995) Disruption of a GATA motif in the Duffy gene promoter abolishes erythroid gene expression in Duffy-negative individuals. Nat Genet 10:224–228
Peiper SC, Wang ZX, Neote K, Martin AW, Showell HJ, Conklyn MJ, Ogborne K, Hadley TJ, Lu ZH, Hesselgesser J, Horuk R (1995) The Duffy antigen/receptor for chemokines (DARC) is expressed in endothelial cells of Duffy negative individuals who lack the erythrocyte receptor. J Exp Med 181:1311–1317
Horuk R, Martin A, Hesselgesser J, Hadley T, Lu ZH, Wang ZX, Peiper SC (1996) The Duffy antigen receptor for chemokines: structural analysis and expression in the brain. J Leukoc Biol 59:29–38
Rios M, Chaudhuri A, Mallinson G, Sausais L, Gomensoro-Garcia AE, Hannon J, Rosenberger S, Poole J, Burgess G, Pogo O, Reid M (2000) New genotypes in Fy(a−b−) individuals: nonsense mutations (Trp to stop) in the coding sequence of either FY A or FY B. Br J Haematol 108:448–454
Miller LH, Mason SJ, Clyde DF, McGinniss MH (1976) The resistance factor to Plasmodium vivax in blacks. The Duffy-blood-group genotype, FyFy, N Engl J Med 295:302–304
Tournamille C, Filipe A, Badaut C, Riottot MM, Longacre S, Cartron JP, Le Van Kim C, Colin Y (2005) Fine mapping of the Duffy antigen binding site for the Plasmodium vivax Duffy-binding protein. Mol Biochem Parasitol 144:100–103
Hans D, Pattnaik P, Bhattacharyya A, Shakri AR, Yazdani SS, Sharma M, Choe H, Farzan M, Chitnis CE (2005) Mapping binding residues in the Plasmodium vivax domain that binds Duffy antigen during red cell invasion. Mol Microbiol 55:1423–1434
Choe H, Moore MJ, Owens CM, Wright PL, Vasilieva N, Li W, Singh AP, Shakri R, Chitnis CE, Farzan M (2005) Sulphated tyrosines mediate association of chemokines and Plasmodium vivax Duffy binding protein with the Duffy antigen/receptor for chemokines (DARC). Mol Microbiol 55:1413–1422
Singh SK, Hora R, Belrhali H, Chitnis CE, Sharma A (2006) Structural basis for Duffy recognition by the malaria parasite Duffy-binding-like domain. Nature 439:741–744
King CL, Michon P, Shakri AR, Marcotty A, Stanisic D, Zimmerman PA, Cole-Tobian JL, Mueller I, Chitnis CE (2008) Naturally acquired Duffy-binding protein-specific binding inhibitory antibodies confer protection from blood-stage Plasmodium vivax infection. Proc Natl Acad Sci USA 105:8363–8836
Grimberg BT, Udomsangpetch R, Xainli J, McHenry A, Panichakul T, Sattabongkot J, Cui L, Bockarie M, Chitnis C, Adams J, Zimmerman PA, King CL (2007) Plasmodium vivax invasion of human erythrocytes inhibited by antibodies directed against the Duffy binding protein. PLoS Med 4:e337
Rosenberg R (2007) Plasmodium vivax in Africa: hidden in plain sight? Trends Parasitol 23:193–196
Cavasini CE, de Mattos LC, Couto AA, Couto VS, Gollino Y, Moretti LJ, Bonini-Domingos CR, Rossit AR, Castilho L, Machado RL (2007) Duffy blood group gene polymorphisms among malaria vivax patients in four areas of the Brazilian Amazon region. Malar J 6:167–175
Menard D, Barnadas C, Bouchier C, Henry-Halldin C, Gray L, Ratsimbasoa A, Thonier V, Carod J-F, Domarle O, Colin Y, Bertrand O, Picot J, King C, Grimberg B, Mercereau-Puijalon O, Zimmerman P (2010) Plasmodium vivax clinical malaria is commonly observed in Duffy-negative Malagasy people. Proc Natl Acad Sci USA 107:5967–5971
Chaudhuri A, Polyakova J, Zbrzezna V, Williams K, Gulati S, Pogo AO (1993) Cloning of glycoprotein D cDNA, which encodes the major subunit of the Duffy blood group system and the receptor for the Plasmodium vivax malaria parasite. Proc Natl Acad Sci USA 90:10793–10797
Iwamoto S, Omi T, Kajii E, Ikemoto S (1995) Genomic organization of the glycoprotein D gene: Duffy blood group Fya/Fyb alloantigen system is associated with a polymorphism at the 44-amino acid residue. Blood 85:622–626
Horuk R, Chitnis CE, Darbonne WC, Colby TJ, Rybicki A, Hadley TJ, Miller LH (1993) A receptor for the malarial parasite Plasmodium vivax: the erythrocyte chemokine receptor. Science 261:1182–1184
Szabo MC, Soo KS, Zlotnik A, Schall TJ (1995) Chemokine class differences in binding to the Duffy antigen-erythrocyte chemokine receptor. J Biol Chem 270:25348–25351
Graham GJ (2009) D6 and the atypical chemokine receptor family: novel regulators of immune and inflammatory processes. Eur J Immunol 39:342–351
Lentsch AB (2002) The Duffy antigen/receptor for chemokines (DARC) and prostate cancer. A role as clear as black and white? FASEB J 16:1093–1095
Addison CL, Belperio JA, Burdick MD, Strieter RM (2004) Overexpression of the duffy antigen receptor for chemokines (DARC) by NSCLC tumor cells results in increased tumor necrosis. BMC Cancer 4:1–28
Wang J, Ou ZL, Hou YF, Luo JM, Shen ZZ, Ding J, Shao ZM (2006) Enhanced expression of Duffy antigen receptor for chemokines by breast cancer cells attenuates growth and metastasis potential. Oncogene 25:7201–7211
Vandercappellen J, Van Damme J, Struyf S (2008) The role of CXC chemokines and their receptors in cancer. Cancer Lett 267:226–244
Gardner L, Wilson C, Patterson AM, Bresnihan B, FitzGerald O, Stone MA, Ashton BA, Middleton J (2006) Temporal expression pattern of Duffy antigen in rheumatoid arthritis: up-regulation in early disease. Arthritis Rheum 54:2022–2026
Murdoch C, Finn A (2000) Chemokine receptors and their role in inflammation and infectious diseases. Blood 95:3032–3043
Segerer S, Regele H, Mac KM, Kain R, Cartron JP, Colin Y, Kerjaschk D, Schlondorff D (2000) The Duffy antigen receptor for chemokines is up-regulated during acute renal transplant rejection and crescentic glomerulonephritis. Kidney Int 58:1546–1556
Zarbock A, Bishop J, Müller H, Schmolke M, Buschmann K, Van Aken H, Singbartl K (2010) Chemokine homeostasis vs chemokine presentation during severe acute lung injury, the other side of the Duffy antigen receptor for chemokines. Am J Physiol Lung Cell Mol Physiol 298:L462–L471
Chakera A, Seeber RM, John AE, Eidne KA, Greaves DR (2008) The duffy antigen/receptor for chemokines exists in an oligomeric form in living cells and functionally antagonizes CCR5 signaling through hetero-oligomerization. Mol Pharmacol 73:1362–1370
Comerford I, Nibbs RJ (2005) Post-translational control of chemokines, a role for decoy receptors ? Immunol Lett 4:163–174
Rot A (2005) Contribution of Duffy antigen to chemokine function. Cytokine Growth Factor Rev 16:687–694
Pruenster M, Rot A (2006) Throwing light on DARC. Biochem Soc Trans 34:1005–1008
He W, Neil S, Kulkarni H, Wright E, Agan BK, Marconi VC, Dolan MJ, Weiss RA, Ahuja SK (2008) Duffy antigen receptor for chemokines mediates trans-infection of HIV-1 from red blood cells to target cells and affects HIV-AIDS susceptibility. Cell Host Microbe 4:52–62
Horne KC, Li X, Jacobson LP, Palella F, Jamieson BD, Margolick JB, Martinson J, Turkozu V, Visvanathan K, Woolley IJ (2009) Duffy antigen polymorphisms do not alter progression of HIV in African Americans in the MACS cohort. Cell Host Microbe 5:415–417
Julg B, Reddy S, van der Stok M, Kulkarni S, Qi Y, Bass S, Gold B, Nalls MA, Nelson GW, Walker BD, Carrington M, Ndung’u T (2009) Lack of Duffy antigen receptor for chemokines, no influence on HIV disease progression in an African treatment-naïve population. Cell Host Microbe 5:413–415
Winkler CA, An P, Johnson R, Nelson GW, Kirk G.(2009) Expression of Duffy antigen receptor for chemokines (DARC) has no effect on HIV-1 acquisition or progression to AIDS in African Americans. Cell Host Microbe 5:411–413
Walley NM, Julg B, Dickson SP, Fellay J, Ge D, Walker BD, Carrington M, Cohen MS, de Bakker PI, Goldstein DB, Shianna KV, Haynes BF, Letvin NL, McMichael AJ, Michael NL, Weintrob AC (2009) The Duffy antigen receptor for chemokines null promoter variant does not influence HIV-1 acquisition or disease progression. Cell Host Microbe, 5:408–410
Beck Z, Brown BK, Wieczorek L, Peachman KK, Matyas GR, Polonis VR, Rao M, Alving CR (2009) Human erythrocytes selectively bind and enrich infectious HIV-1 virions. PLoS One 4:e8297
Kulkarni H, Marconi VC, He W, Landrum ML, Okulicz JF, Delmar J, Kazandjian D, Castiblanco J, Ahuja SS, Wright EJ, Weiss RA, Clark RA, Dolan MJ, Ahuja SK (2009) The Duffy-null state is associated with a survival advantage in leukopenic HIV-infected persons of African ancestry. Blood 114:2783–2792
Hamers-Casterman C, Atarhouch T, Muyldermans S, Robinson G, Hamers C, Songa EB, Bendahman N, Hamers R (1993) Naturally occurring antibodies devoid of light chains. Nature 363:446–448
Muyldermans S, Baral TN, Retamozzo VC, De Baetselier P, De Genst E, Kinne J, Leonhardt H, Magez S, Nguyen VK, Revets H, Rothbauer U, Stijlemans B, Tillib S, Wernery U, Wyns L, Hassanzadeh-Ghassabeh G, Saerens D (2009) Camelid immunoglobulins and nanobody technology. Vet Immunol Immunopathol 128:178–183
Saerens D, Frederix F, Reekmans G, Conrath K, Jans K, Brys L, Huang L, Bosmans E, Maes G, Borghs G, Muyldermans S (2005) Engineering camel single-domain antibodies and immobilization chemistry for human prostate-specific antigen sensing. Anal Chem 77:7547–7555
Conrath K, Pereira AS, Martins CE, Timóteo CG, Tavares P, Spinelli S, Kinne J, Flaudrops C, Cambillau C, Muyldermans S, Moura I, Moura JJ, Tegoni M, Desmyter A (2009) Camelid nanobodies raised against an integral membrane enzyme, nitric oxide reductase. Protein Sci 18:619–628
Tereshko V, Uysal S, Koide A, Margalef K, Koide S, Kossiakoff AA (2008) Toward chaperone-assisted crystallography, protein engineering enhancement of crystal packing and X-ray phasing capabilities of a camelid single-domain antibody (VHH) scaffold. Protein Sci 17:1175–1187
Baral TN, Magez S, Stijlemans B, Conrath K, Vanhollebeke B, Pays E, Muyldermans S, De Baetselier P (2006) Experimental therapy of African trypanosomiasis with a nanobody-conjugated human trypanolytic factor. Nat Med 12:580–584
Abderrazek RB, Hmila I, Vincke C, Benlasfar Z, Pellis M, Dabbek H, Saerens D, El Ayeb M, Muyldermans S, Bouhaouala-Zahar B (2009) Identification of potent nanobodies to neutralize the most poisonous polypeptide from scorpion venom. Biochem J 424:263–272
Studier FW, Rosenberg AH, Dunn JJ, Dubendorff JW (1990) Use of T7 RNA polymerase to direct expression of cloned genes. Methods Enzymol 185:60–89
Studier FW (2005) Protein production by auto-induction in high density shaking cultures. Protein Expr Purif 41:207–234
Geysen HM, Rodda SJ, Mason TJ, Tribbick G, Schoofs PG (1987) Strategies for epitope analysis using peptide synthesis. J Immunol Methods 102:259–274
Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI-BLAST, a new generation of protein database search programs. Nucleic Acids Res 25:3389–3402
Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE (2000) The protein data bank. Nucleic Acids Res 28:235–242
Decanniere K, Transue TR, Desmyter A, Maes D, Muyldermans S, Wyns L (2001) Degenerate interfaces in antigen-antibody complexes. J Mol Biol 313:473–478
Dumoulin M, Last AM, Desmyter A, Decanniere K, Canet D, Larsson G, Spencer A, Archer DB, Sasse J, Muyldermans S, Wyns L, Redfield C, Matagne A, Robinson CV, Dobson CM (2003) A camelid antibody fragment inhibits the formation of amyloid fibrils by human lysozyme. Nature 424:783–788
Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL_X windows interface, flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876–4882
Sali A, Blundell TL (1993) Comparative protein modelling by satisfaction of spatial restraints. J Mol Biol 234:779–815
Laskowski RA, Moss DS, Thornton JM (1993) Main-chain bond lengths and bond angles in protein structures. J Mol Biol 231:1049–1067
Shibuya N, Goldstein IJ, Broekaert WF, Nsimba-Lubaki M, Peeters B, Peumans WJ (1987) The elderberry (Sambucus nigra L.) bark lectin recognizes the Neu5Ac(alpha 2–6)Gal/GalNAc sequence. J Biol Chem 262:1596–1601
Grodecka M, Czerwiński M, Duk M, Lisowska E, Waśniowska K (2010) Analysis of recombinant Duffy protein-linked N-glycans using lectins and glycosidases. Acta Biochim Pol 57:49–53
Czerwinski M, Kern J, Grodecka M, Paprocka M, Krop-Watorek A, Wasniowska K (2007) Mutational analysis of the N-glycosylation sites of Duffy antigen/receptor for chemokines. Biochem Biophys Res Commun 356:816–821
Tournamille C, Filipe A, Wasniowska K, Gane P, Lisowska E, Cartron JP, Colin Y, Le Van Kim C (2003) Structure-function analysis of the extracellular domains of the Duffy antigen/receptor for chemokines, characterization of antibody and chemokine binding sites. Br J Haematol 122:1014–1023
De Genst E, Silence K, Decanniere K, Conrath K, Loris R, Kinne J, Muyldermans S, Wyns L (2006) Molecular basis for the preferential cleft recognition by dromedary heavy-chain antibodies. Proc Natl Acad Sci USA 103:4586–4591
Gallivan JP, Dougherty DA (1999) Cation-pi interactions in structural biology. Proc Natl Acad Sci USA 96:9459–9464
Nguyen VK, Hamers R, Wyns L, Muyldermans S (2000) Camel heavy-chain antibodies : diverse germline V(H)H and specific mechanisms enlarge the antigen-binding repertoire. EMBO J 19:921–930
Handel TM, Horuk R (2010) Duffy antigen inhibitors, useful therapeutics for malaria? Trends Parasitol, (in press). doi:10.1016/j.pt.2010.03.010
Kasehagen LJ, Mueller I, Kiniboro B, Bockarie MJ, Reeder JC, Kazura JW, Kastens W, McNamara DT, King C, Whalen CC, Zimmerman PA (2007) Reduced Plasmodium vivax erythrocyte infection in PNG Duffy-negative heterozygotes. PLoS One 2:e336
Albuquerque SR, de Oliveira Cavalcante F, Sanguino EC, Tezza L, Chacon F, Castilho L, Dos Santos MC (2010) FY polymorphisms and vivax malaria in inhabitants of Amazonas State, Brazil. Parasitol Res 106:1049–1053
Mariette N, Barnadas C, Bouchier C, Tichit M, Ménard D (2008) Country-wide assessment of the genetic polymorphism in Plasmodium falciparum and Plasmodium vivax antigens detected with rapid diagnostic tests for malaria. Malar J 7:219–227
Johnson Z, Schwarz M, Power CA, Wells TN, Proudfoot AE (2005) Multi-faceted strategies to combat disease by interference with the chemokine system. Trends Immunol 26:268–274
Wells TN, Power CA, Shaw JP, Proudfoot AE (2006) Chemokine blockers–therapeutics in the making? Trends Pharmacol Sci 27:41–47
Furthmayr H, Marchesi VT (1976) Subunit structure of human erythrocyte glycophorin A. Biochemistry 15:1137–1144
Grisshammer R (2009) Purification of recombinant G-protein-coupled receptors. Methods Enzymol 463:631–645
Blackburn PE (2004) Purification and biochemical characterization of the D6 chemokine receptor. Biochem J 379:263–272
Field J, Nikawa J, Broekv D, MacDonaldv B, Rodgers L, Wilson IA, Lerner RA, Wigler M (1988) Purification of a RAS-responsive adenylyl cyclase complex from Saccharomyces cerevisiae by use of an epitope addition method. Mol Cell Biol 8:2159–2165
Chelikani P, Reeves PJ, Rajbhandaryv UL, Khorana HG (2006) The synthesis and high-level expression of a beta2-adrenergic receptor gene in a tetracycline-inducible stable mammalian cell line. Protein Sci 15:1433–1440
Mouro-Chanteloup I, Cochet C, Chami M, Genetet S, Zidi-Yahiaoui N, Engel A, Colin Y, Bertrand O, Ripoche P (2010) Functional reconstitution into liposomes of purified human RhCG ammonia channel. PLoS One 5:e8921
Acknowledgments
The deepest gratitude is due to Inge Mestdagh and Jan van Gompel for their generous help and their patient teaching during library construction and screening. D.S. was supported by scholarship from French Embassy in Warsaw and from the Flemish government. The project was supported by grant no. N N302 118835 from the Ministry of Science and Higher Education of Poland and in part by a Polonium Partenariat Hubert Curien grant. Authors thank Dr. Bach Nga Pham and Eliane Vera at CNRGS for making available phenotyped human blood, Dr. Christophe Tournamille for the recombinant K562 cells, and Prof. Donald Engelman for the plasmid used for some of the E. coli protein productions.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Smolarek, D., Hattab, C., Hassanzadeh-Ghassabeh, G. et al. A recombinant dromedary antibody fragment (VHH or nanobody) directed against human Duffy antigen receptor for chemokines. Cell. Mol. Life Sci. 67, 3371–3387 (2010). https://doi.org/10.1007/s00018-010-0387-6
Received:
Revised:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s00018-010-0387-6