CEUR-WS
Identifier
http://ceur-ws.org/Vol-2849/
Volume
Vol-2849
URN
urn:nbn:de:0074-2849-9
Language
eng
License
CC BYCopyright © 2019 for the individual papers by the papers' authors. Copyright © 2019 for the volume as a collection by its editors. This volume and its papers are published under the Creative Commons License Attribution 4.0 International (CC BY 4.0).

SWAT4HCLS 2019 Semantic Web Applications and Tools for Health Care and Life Sciences

Event
12th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences
Location
Edinburgh, Scotland
Date
to
Edited by
Ronald Cornet1
Andra Waagmeester2
  • 1Amsterdam UMC, University of Amsterdam, The Netherlands
  • 2Micelio, Antwerp, Belgium

Table of Contents

  1. Preface
  2. Enhancing the Maintainability of the Bio2RDF Project Using Declarative Mappings
    Pages
    110
    Authors
    Ana Iglesias-Molina
    David Chaves-Fraga
    Freddy Priyatna
    Oscar Corcho
  3. Suggesting Reasonable Phenotypes to Clinicians
    Pages
    1119
    Authors
    Laura Slaughter
    Dag Hovland
  4. A FHIR-to-RDF Converter
    Pages
    2025
    Authors
    Gerhard Kober
    Adrian Paschke
  5. A Framework for Representing Clinical Research in FHIR
    Pages
    2635
    Authors
    Hugo Leroux
    Christine K. Denney
    Smita Hastak
    Hugh Glover
  6. Reconciling Author Names in Taxonomic and Publication Databases
    Pages
    3643
    Authors
    Roderic D. M. Page
  7. On Bringing Bioimaging Data into the Open (World)
    Pages
    4453
    Authors
    Josh Moore
    Norio Kobayashi
    Susanne Kunis
    Shuichi Onami
    Jason R. Swedlow
  8. Making Clinical Trials available at the Point of Care - connecting Clinical Trials to Electronic Health Records using SNOMED CT and HL7 InfoButton Standards
    Pages
    5463
    Authors
    Jay Kola
    Wai Keong Wong
    Bhavana Buddala
  9. A Blueprint for Semantically Lifting Field Trial Data: Enabling Exploration using Knowledge Graphs
    Pages
    6473
    Authors
    Daniel Burkow
    Jens Hollunder
    Julian Heinrich
    Fuad Abdallah
    Miguel A. Rojas-Macias
    Cord Wiljes
    Philipp Cimiano
    Philipp Senger
  10. Documentation Gap in Ontology Creation: Insights into the Reality of Knowledge Formalization in a Life Science Company
    Pages
    7483
    Authors
    Marius Michaelis
    Olga Streibel
  11. Partitioning of BioPortal Ontologies: An Empirical Study
    Pages
    8493
    Authors
    Alsayed Algergawy
    Birgitta König-Ries
  12. Annotation of Existing Databases using Semantic Web Technologies: Making Data more FAIR
    Pages
    94101
    Authors
    Johan van Soest
    Ananya Choudhury
    Nikhil Gaikwad
    Matthijs Sloep
    Michel Dumontier
    Andre Dekker
  13. FAIRness of openEHR Archetypes and Templates
    Pages
    102111
    Authors
    Caroline Bönisch
    Anneka Sargeant
    Antje Wulff
    Marcel Parciak
    Christian R. Bauer
    Ulrich Sax
  14. A Working Semantic Model for the Integration of Occupation, Function and Health
    Pages
    112121
    Authors
    Anil Adisesh
    Hongchang Bao
    Mohammad Sadnan Al Manir
    Christopher J. O. Baker
  15. FAIR Quantitative Imaging in Oncology: how Semantic Web and Ontologies will support Reproducible Science
    Pages
    122126
    Authors
    Alberto Traverso
    Zhenwei Shi
    Leonard Wee
    Andre Dekker
  16. Realizing FAIR Data in an Enterprise Environment
    Pages
    127130
    Authors
    Melanie Hackl
    Goekhan Coskun
  17. Semi-Automated Data-Driven Methods to Support Ontology Development: A Case Study on a Rehabilitation Therapy Ontology
    Pages
    131132
    Authors
    Mohammad K. Halawani
    Rob Forsyth
    Phillip Lord
  18. Mapping Subjects and Domains across the Humanities and Natural Sciences in FAIRsharing
    Pages
    133134
    Authors
    Allyson L. Lister
    Peter McQuilton
    Milo Thurston
    Susanna-Assunta Sansone
  19. Babylon Health's Medical Knowledge Graph: Why, What, and How
    Pages
    135136
    Authors
    Claudia Schulz
    Damir Juric
    Jetendr Shamdasani
    Martin Coste
    Szymon Wartak
    Aleksandar Savkov
    Nils Hammerla
    Mohammad Khodadadi
  20. Implementing FAIR Principles in InterMine
    Pages
    137138
    Authors
    Daniela Butano
    Justin Clark-Casey
    Sergio Contrino
    Josh Heimbach
    Rachel Lyne
    Kevin Herald Reierskog
    Julie Sullivan
    Yo Yehudi
    Gos Micklem
  21. MOLGENIS Catalogue - towards a Unified Application for Data and Sample Catalogues
    Pages
    139140
    Authors
    Alexander Kellmann
    David van Enckevort
    Marije van der Geest
    Aneas Hodselmans
    Morris A. Swertz
  22. Transformation and Integration of Heterogeneous Health Data in a Privacy-preserving Distributed Learning Infrastructure
    Pages
    141142
    Authors
    Chang Sun
    Vincent Emonet
    Johan van Soest
    Annemarie Koster
    Andre Dekker
    Michel Dumontier
  23. Publishing Linked and FAIR-compliant Radiomics Data in Radiation Oncology via Ontologies and Semantic Web Techniques
    Pages
    143144
    Authors
    Alberto Traverso
    Martin Vallières
    Johan van Soest
    Leonard Wee
    Olivier Morin
    Andre Dekker
  24. Ontology Mapping for the Laboratory Analytics Domain
    Pages
    145146
    Authors
    Ian Harrow
    Thomas Liener
    Ernesto Jimenez-Ruiz
  25. Semantic Integration of Intrinsically Disordered Proteins and Existing DBs
    Pages
    147148
    Authors
    Atsuko Yamaguchi
    Hideki Hatanaka
    Satoshi Fukuchi
    Motonori Ota
  26. OME Core Ontology: An OWL-based Life Science Imaging Data Model
    Pages
    149150
    Authors
    Norio Kobayashi
    Josh Moore
    Shuichi Onami
    Jason R. Swedlow
  27. UmakaData Extension: Toward Realization of a Practical SPARQL Endpoint Discovery Service for Life Sciences
    Pages
    151152
    Authors
    Norio Kobayashi
    Yasunori Yamamoto
    Atsuko Yamaguchi
  28. The 4DN-OME Ontology: an OME-OWL Extension with Emphasis on Usability, Minimum Information Guidelines and Quality Control for Super-resolution Fluorescence Microscopy
    Pages
    153154
    Authors
    Mathias Hammer
    Alessandro Rigano
    Farzin Farzam
    Maximiliaan Huisman
    David Grunwald
    Caterina Strambio-De-Castillia
  29. A Modular Approach to Knowledge Graphs and FAIR Data in Healthcare
    Pages
    155156
    Authors
    Matthijs Sloep
    Petros Kalendralis
    Johan van Soest
    Rianne Fijten
  30. Finding RDF Data you need by Umaka Suite
    Pages
    157158
    Authors
    Yasunori Yamamoto
    Atsuko Yamaguchi
  31. Species Association Knowledge Graph Construction - A Demo Paper
    Pages
    159160
    Authors
    Dina Sharafeldeen
    Alsayed Algergawy
    Birgitta König-Ries
  32. Med2RDF: Semantic Biomedical Knowledge-base and APIs for the Clinical Genome Medicine
    Pages
    161162
    Authors
    Mayumi Kamada
    Toshiaki Katayama
    Shuichi Kawashima
    Ryosuke Kojima
    Masahiko Nakatsui
    Yasushi Okuno
  33. MetaStanza: Generic WebComponents Widgets for Visualizing SPARQL Results on the Web
    Pages
    163164
    Authors
    Toshiaki Katayama
  34. Integrated Growth Media Database by Standardizing Ingredient Information
    Pages
    165166
    Authors
    Shuichi Kawashima
    Toshiaki Katayama
    Yuki Moriya
    Shinobu Okamoto
    Yasunori Yamamoto
    Susumu Goto
  35. SemanticGenomeGraphs
    Pages
    167168
    Authors
    Simon Heumos
    Jerven Bolleman
  36. Network Building with Cytoscape App Queries to the BioGateway 3.0 Triple Store
    Pages
    169170
    Authors
    Stian Holmås
    Vladimir Mironov
    Martin Kuiper

We offer a BibTeX file for citing papers of this workshop from LaTeX.